tool_data

This section is auto-generated from the help text for the parsec command tool_data.

delete_data_table command

Usage:

parsec tool_data delete_data_table [OPTIONS] DATA_TABLE_ID VALUES

Help

Delete an item from a data table.

Output

Options:

-h, --help  Show this message and exit.

get_data_tables command

Usage:

parsec tool_data get_data_tables [OPTIONS]

Help

Get the list of all data tables.

Output

A list of dicts with details on individual data tables.

For example:

[{"model_class": "TabularToolDataTable", "name": "fasta_indexes"},
 {"model_class": "TabularToolDataTable", "name": "bwa_indexes"}]

Options:

-h, --help  Show this message and exit.

reload_data_table command

Usage:

parsec tool_data reload_data_table [OPTIONS] DATA_TABLE_ID

Help

Reload a data table.

Output

A description of the given data table and its content.

For example:

{"columns": ["value", "dbkey", "name", "path"],
 "fields": [["test id",
   "test",
   "test name",
   "/opt/galaxy-dist/tool-data/test/seq/test id.fa"]],
 "model_class": "TabularToolDataTable",
 "name": "all_fasta"}

Options:

-h, --help  Show this message and exit.

show_data_table command

Usage:

parsec tool_data show_data_table [OPTIONS] DATA_TABLE_ID

Help

Get details of a given data table.

Output

A description of the given data table and its content.

For example:

{"columns": ["value", "dbkey", "name", "path"],
 "fields": [["test id",
   "test",
   "test name",
   "/opt/galaxy-dist/tool-data/test/seq/test id.fa"]],
 "model_class": "TabularToolDataTable",
 "name": "all_fasta"}

Options:

-h, --help  Show this message and exit.